Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm8100-201ENSMUST00000182906 988 ntBASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Gm42518-201ENSMUST00000196277 938 ntBASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Gm10288-201ENSMUST00000084614 537 ntBASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Gm22877-201ENSMUST00000175451 105 ntBASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx54Q8K4L0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Gm13384-201ENSMUST00000117166 1344 ntBASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Mir1956-201ENSMUST00000157748 65 ntBASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Gm19994-201ENSMUST00000217086 586 ntBASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Gm8325-201ENSMUST00000099086 453 ntBASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx54Q8K4L0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms