Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.34□□□□□ -0.11
Syne4Q8CII8 Gm13888-201ENSMUST00000119148 422 ntBASIC14.34□□□□□ -0.11
Syne4Q8CII8 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.34□□□□□ -0.11
Syne4Q8CII8 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.34□□□□□ -0.11
Syne4Q8CII8 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.34□□□□□ -0.11
Syne4Q8CII8 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Syne4Q8CII8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Syne4Q8CII8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Syne4Q8CII8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Syne4Q8CII8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Syne4Q8CII8 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.33□□□□□ -0.12
Syne4Q8CII8 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.33□□□□□ -0.12
Syne4Q8CII8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.33□□□□□ -0.12
Syne4Q8CII8 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Gm23251-201ENSMUST00000103773 110 ntBASIC14.33□□□□□ -0.12
Syne4Q8CII8 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Gm18038-201ENSMUST00000197900 485 ntBASIC14.33□□□□□ -0.12
Syne4Q8CII8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syne4Q8CII8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.33□□□□□ -0.12
Syne4Q8CII8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Gm1821-202ENSMUST00000227415 750 ntBASIC14.33□□□□□ -0.12
Syne4Q8CII8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.33□□□□□ -0.12
Syne4Q8CII8 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Syne4Q8CII8 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.33□□□□□ -0.12
Syne4Q8CII8 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.33□□□□□ -0.12
Syne4Q8CII8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Syne4Q8CII8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.32□□□□□ -0.12
Syne4Q8CII8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Gm12029-201ENSMUST00000120073 832 ntBASIC14.32□□□□□ -0.12
Syne4Q8CII8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.32□□□□□ -0.12
Syne4Q8CII8 Rmrp-201ENSMUST00000157463 271 ntBASIC14.32□□□□□ -0.12
Syne4Q8CII8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Gm37246-201ENSMUST00000192665 835 ntBASIC14.32□□□□□ -0.12
Syne4Q8CII8 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.32□□□□□ -0.12
Syne4Q8CII8 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Gm9996-201ENSMUST00000070359 913 ntBASIC14.32□□□□□ -0.12
Syne4Q8CII8 Gm21811-201ENSMUST00000096485 930 ntBASIC14.32□□□□□ -0.12
Syne4Q8CII8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.32□□□□□ -0.12
Syne4Q8CII8 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.32□□□□□ -0.12
Syne4Q8CII8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.32□□□□□ -0.12
Syne4Q8CII8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Syne4Q8CII8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syne4Q8CII8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms