Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.11□□□□□ -0.15
Trim35Q8C006 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 AC131120.1-201ENSMUST00000217728 1617 ntBASIC14.11□□□□□ -0.15
Trim35Q8C006 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim35Q8C006 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim35Q8C006 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim35Q8C006 Gm10997-201ENSMUST00000210294 1500 ntBASIC14.1□□□□□ -0.15
Trim35Q8C006 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim35Q8C006 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.1□□□□□ -0.15
Trim35Q8C006 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Gm29245-201ENSMUST00000187332 1416 ntBASIC14.1□□□□□ -0.15
Trim35Q8C006 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trim35Q8C006 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Gm13454-201ENSMUST00000118166 483 ntBASIC14.1□□□□□ -0.15
Trim35Q8C006 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim35Q8C006 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim35Q8C006 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim35Q8C006 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim35Q8C006 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trim35Q8C006 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim35Q8C006 Gm8506-201ENSMUST00000186661 829 ntBASIC14.1□□□□□ -0.15
Trim35Q8C006 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim35Q8C006 Gm7063-201ENSMUST00000186840 981 ntBASIC14.1□□□□□ -0.15
Trim35Q8C006 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC14.1□□□□□ -0.15
Trim35Q8C006 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Gm44412-201ENSMUST00000203018 294 ntBASIC14.1□□□□□ -0.15
Trim35Q8C006 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Gm44636-201ENSMUST00000206130 755 ntBASIC14.1□□□□□ -0.15
Trim35Q8C006 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.1□□□□□ -0.15
Trim35Q8C006 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim35Q8C006 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim35Q8C006 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim35Q8C006 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trim35Q8C006 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trim35Q8C006 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim35Q8C006 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim35Q8C006 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim35Q8C006 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm14465-201ENSMUST00000120603 567 ntBASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim35Q8C006 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm9726-201ENSMUST00000180321 678 ntBASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm27618-201ENSMUST00000183671 60 ntBASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm28630-201ENSMUST00000187806 498 ntBASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm19224-201ENSMUST00000190477 793 ntBASIC14.09□□□□□ -0.15
Trim35Q8C006 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim35Q8C006 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm44053-201ENSMUST00000203364 929 ntBASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm9182-201ENSMUST00000217829 639 ntBASIC14.09□□□□□ -0.15
Trim35Q8C006 AC192616.1-201ENSMUST00000221922 132 ntBASIC14.09□□□□□ -0.15
Trim35Q8C006 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim35Q8C006 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Pfdn4-202ENSMUST00000075087 816 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim35Q8C006 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm43972-201ENSMUST00000181398 1467 ntBASIC14.09□□□□□ -0.15
Trim35Q8C006 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim35Q8C006 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms