Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Gm25857-201ENSMUST00000082788 129 ntBASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Gm2420-201ENSMUST00000119864 2149 ntBASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Gm3287-205ENSMUST00000228893 1332 ntBASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc30Q8BVF4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Ccdc30Q8BVF4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ccdc30Q8BVF4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc30Q8BVF4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Gm13492-201ENSMUST00000119772 665 ntBASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Snora78-201ENSMUST00000158630 128 ntBASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC16.38■□□□□ 0.21
Ccdc30Q8BVF4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc30Q8BVF4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc30Q8BVF4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc30Q8BVF4 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.37■□□□□ 0.21
Ccdc30Q8BVF4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc30Q8BVF4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc30Q8BVF4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc30Q8BVF4 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc30Q8BVF4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc30Q8BVF4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc30Q8BVF4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc30Q8BVF4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc30Q8BVF4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms