Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Srrm4Q8BKA3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Srrm4Q8BKA3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Srrm4Q8BKA3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Srrm4Q8BKA3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Srrm4Q8BKA3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Srrm4Q8BKA3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Srrm4Q8BKA3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Srrm4Q8BKA3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Srrm4Q8BKA3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Srrm4Q8BKA3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Gm25261-201ENSMUST00000157416 134 ntBASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Gm25927-201ENSMUST00000175058 117 ntBASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Matn2-203ENSMUST00000226766 3252 ntBASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Srrm4Q8BKA3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms