Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf38bQ80SY5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Gm10434-201ENSMUST00000101158 471 ntBASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Gm2231-201ENSMUST00000125661 612 ntBASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Gm25732-201ENSMUST00000175168 60 ntBASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Gm5781-201ENSMUST00000219792 443 ntBASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Prpf38bQ80SY5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Snord83b-201ENSMUST00000104546 94 ntBASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Gm14665-201ENSMUST00000122294 557 ntBASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Gm38317-201ENSMUST00000195564 343 ntBASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf38bQ80SY5 AC154849.3-201ENSMUST00000223733 1660 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms