Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc88cQ6VGS5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88cQ6VGS5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88cQ6VGS5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88cQ6VGS5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88cQ6VGS5 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc88cQ6VGS5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Gm42937-201ENSMUST00000197360 752 ntBASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Gm15547-201ENSMUST00000122152 333 ntBASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Gm25668-201ENSMUST00000157700 129 ntBASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Ccdc88cQ6VGS5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Gm24231-201ENSMUST00000104315 133 ntBASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Gm11439-201ENSMUST00000118598 409 ntBASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88cQ6VGS5 Mir877-201ENSMUST00000104738 85 ntBASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Gm24749-201ENSMUST00000157838 343 ntBASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Gm27023-201ENSMUST00000182372 285 ntBASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc88cQ6VGS5 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms