Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.75□□□□□ -0.69
Rif1Q6PR54 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Gm37201-201ENSMUST00000191845 523 ntBASIC10.75□□□□□ -0.69
Rif1Q6PR54 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Gm7719-201ENSMUST00000182374 975 ntBASIC10.75□□□□□ -0.69
Rif1Q6PR54 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.75□□□□□ -0.69
Rif1Q6PR54 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rif1Q6PR54 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.74□□□□□ -0.69
Rif1Q6PR54 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm17877-201ENSMUST00000192578 814 ntBASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm6390-201ENSMUST00000215034 589 ntBASIC10.74□□□□□ -0.69
Rif1Q6PR54 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 AC137950.2-202ENSMUST00000227150 1635 ntBASIC10.74□□□□□ -0.69
Rif1Q6PR54 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm22594-201ENSMUST00000104251 130 ntBASIC10.74□□□□□ -0.69
Rif1Q6PR54 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm12419-201ENSMUST00000116649 636 ntBASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm14644-201ENSMUST00000116671 647 ntBASIC10.74□□□□□ -0.69
Rif1Q6PR54 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm20694-201ENSMUST00000176943 404 ntBASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm8531-201ENSMUST00000188319 893 ntBASIC10.74□□□□□ -0.69
Rif1Q6PR54 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms