Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.55□□□□□ -0.4
VclQ64727 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VclQ64727 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VclQ64727 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
VclQ64727 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VclQ64727 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
VclQ64727 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
VclQ64727 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VclQ64727 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VclQ64727 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.55□□□□□ -0.4
VclQ64727 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VclQ64727 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VclQ64727 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
VclQ64727 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.54□□□□□ -0.4
VclQ64727 Gm6023-201ENSMUST00000118217 606 ntBASIC12.54□□□□□ -0.4
VclQ64727 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.54□□□□□ -0.4
VclQ64727 Gm13492-201ENSMUST00000119772 665 ntBASIC12.54□□□□□ -0.4
VclQ64727 Gm11591-201ENSMUST00000120063 702 ntBASIC12.54□□□□□ -0.4
VclQ64727 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.54□□□□□ -0.4
VclQ64727 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
VclQ64727 Gm25261-201ENSMUST00000157416 134 ntBASIC12.54□□□□□ -0.4
VclQ64727 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.54□□□□□ -0.4
VclQ64727 Gm5904-201ENSMUST00000210286 865 ntBASIC12.54□□□□□ -0.4
VclQ64727 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
VclQ64727 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.54□□□□□ -0.4
VclQ64727 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.54□□□□□ -0.4
VclQ64727 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.54□□□□□ -0.4
VclQ64727 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.54□□□□□ -0.4
VclQ64727 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.54□□□□□ -0.4
VclQ64727 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VclQ64727 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.54□□□□□ -0.4
VclQ64727 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.54□□□□□ -0.4
VclQ64727 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.54□□□□□ -0.4
VclQ64727 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VclQ64727 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VclQ64727 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VclQ64727 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.53□□□□□ -0.4
VclQ64727 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.53□□□□□ -0.4
VclQ64727 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Mir1247-201ENSMUST00000116706 82 ntBASIC12.53□□□□□ -0.4
VclQ64727 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.53□□□□□ -0.4
VclQ64727 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.53□□□□□ -0.4
VclQ64727 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Gm7809-201ENSMUST00000153199 742 ntBASIC12.53□□□□□ -0.4
VclQ64727 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.53□□□□□ -0.4
VclQ64727 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.53□□□□□ -0.4
VclQ64727 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.53□□□□□ -0.4
VclQ64727 Gm43133-201ENSMUST00000197472 463 ntBASIC12.53□□□□□ -0.4
VclQ64727 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.53□□□□□ -0.4
VclQ64727 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.53□□□□□ -0.4
VclQ64727 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.53□□□□□ -0.4
VclQ64727 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.53□□□□□ -0.4
VclQ64727 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.53□□□□□ -0.4
VclQ64727 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.53□□□□□ -0.4
VclQ64727 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.53□□□□□ -0.4
VclQ64727 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
VclQ64727 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VclQ64727 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VclQ64727 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
VclQ64727 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VclQ64727 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms