Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm17826-201ENSMUST00000189720 798 ntBASIC14.69□□□□□ -0.06
Scn9aQ62205 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.69□□□□□ -0.06
Scn9aQ62205 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.69□□□□□ -0.06
Scn9aQ62205 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn9aQ62205 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Scn9aQ62205 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.69□□□□□ -0.06
Scn9aQ62205 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.69□□□□□ -0.06
Scn9aQ62205 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn9aQ62205 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn9aQ62205 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn9aQ62205 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.69□□□□□ -0.06
Scn9aQ62205 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn9aQ62205 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn9aQ62205 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
Scn9aQ62205 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn9aQ62205 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn9aQ62205 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn9aQ62205 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn9aQ62205 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.69□□□□□ -0.06
Scn9aQ62205 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn9aQ62205 Gm24891-201ENSMUST00000104391 136 ntBASIC14.69□□□□□ -0.06
Scn9aQ62205 Gm13600-201ENSMUST00000117949 744 ntBASIC14.69□□□□□ -0.06
Scn9aQ62205 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.69□□□□□ -0.06
Scn9aQ62205 Gm12628-201ENSMUST00000122193 382 ntBASIC14.69□□□□□ -0.06
Scn9aQ62205 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn9aQ62205 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.69□□□□□ -0.06
Scn9aQ62205 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Scn9aQ62205 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.69□□□□□ -0.06
Scn9aQ62205 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn9aQ62205 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.68□□□□□ -0.06
Scn9aQ62205 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.68□□□□□ -0.06
Scn9aQ62205 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Scn9aQ62205 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Scn9aQ62205 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.68□□□□□ -0.06
Scn9aQ62205 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Scn9aQ62205 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Scn9aQ62205 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.68□□□□□ -0.06
Scn9aQ62205 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.68□□□□□ -0.06
Scn9aQ62205 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Scn9aQ62205 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn9aQ62205 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Scn9aQ62205 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.67□□□□□ -0.06
Scn9aQ62205 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.67□□□□□ -0.06
Scn9aQ62205 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Scn9aQ62205 Gm37458-201ENSMUST00000194055 410 ntBASIC14.67□□□□□ -0.06
Scn9aQ62205 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.67□□□□□ -0.06
Scn9aQ62205 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.67□□□□□ -0.06
Scn9aQ62205 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Scn9aQ62205 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Scn9aQ62205 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.67□□□□□ -0.06
Scn9aQ62205 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.67□□□□□ -0.06
Scn9aQ62205 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Scn9aQ62205 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Scn9aQ62205 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Grk6-205ENSMUST00000224653 2976 ntBASIC14.67□□□□□ -0.06
Scn9aQ62205 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn9aQ62205 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC14.67□□□□□ -0.06
Scn9aQ62205 Gm11801-201ENSMUST00000117807 746 ntBASIC14.67□□□□□ -0.06
Scn9aQ62205 Gm13668-201ENSMUST00000119237 1001 ntBASIC14.67□□□□□ -0.06
Scn9aQ62205 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms