Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
VcanQ62059 Gm12453-201ENSMUST00000121981 331 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
VcanQ62059 Gm17070-201ENSMUST00000170463 784 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
VcanQ62059 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.62□□□□□ -0.55
VcanQ62059 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.62□□□□□ -0.55
VcanQ62059 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
VcanQ62059 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
VcanQ62059 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
VcanQ62059 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.61□□□□□ -0.55
VcanQ62059 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
VcanQ62059 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
VcanQ62059 Gm22442-201ENSMUST00000157256 144 ntBASIC11.61□□□□□ -0.55
VcanQ62059 Gm25226-201ENSMUST00000158198 123 ntBASIC11.61□□□□□ -0.55
VcanQ62059 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
VcanQ62059 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
VcanQ62059 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
VcanQ62059 Gm24398-201ENSMUST00000157870 109 ntBASIC11.61□□□□□ -0.55
VcanQ62059 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.61□□□□□ -0.55
VcanQ62059 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.61□□□□□ -0.55
VcanQ62059 Gm18123-201ENSMUST00000210874 822 ntBASIC11.61□□□□□ -0.55
VcanQ62059 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.61□□□□□ -0.55
VcanQ62059 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.61□□□□□ -0.55
VcanQ62059 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Gm22146-201ENSMUST00000157397 288 ntBASIC11.61□□□□□ -0.55
VcanQ62059 Gm29763-201ENSMUST00000205306 616 ntBASIC11.61□□□□□ -0.55
VcanQ62059 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VcanQ62059 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.6□□□□□ -0.55
VcanQ62059 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.6□□□□□ -0.55
VcanQ62059 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Gm12663-201ENSMUST00000118481 958 ntBASIC11.6□□□□□ -0.55
VcanQ62059 Gm14234-201ENSMUST00000119539 845 ntBASIC11.6□□□□□ -0.55
VcanQ62059 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.6□□□□□ -0.55
VcanQ62059 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.6□□□□□ -0.55
VcanQ62059 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
VcanQ62059 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
VcanQ62059 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.6□□□□□ -0.55
VcanQ62059 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
VcanQ62059 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VcanQ62059 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms