Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vsx2Q61412 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Vsx2Q61412 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.42□□□□□ -0.42
Vsx2Q61412 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Gm12742-201ENSMUST00000117326 410 ntBASIC12.42□□□□□ -0.42
Vsx2Q61412 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.42□□□□□ -0.42
Vsx2Q61412 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.42□□□□□ -0.42
Vsx2Q61412 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Gm27682-201ENSMUST00000183930 110 ntBASIC12.42□□□□□ -0.42
Vsx2Q61412 Gm28693-202ENSMUST00000190758 331 ntBASIC12.42□□□□□ -0.42
Vsx2Q61412 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.42□□□□□ -0.42
Vsx2Q61412 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Vsx2Q61412 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.42□□□□□ -0.42
Vsx2Q61412 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.42□□□□□ -0.42
Vsx2Q61412 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.42□□□□□ -0.42
Vsx2Q61412 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vsx2Q61412 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vsx2Q61412 Gm10268-201ENSMUST00000085340 555 ntBASIC12.42□□□□□ -0.42
Vsx2Q61412 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.42□□□□□ -0.42
Vsx2Q61412 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.42□□□□□ -0.42
Vsx2Q61412 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vsx2Q61412 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vsx2Q61412 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.42□□□□□ -0.42
Vsx2Q61412 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
Vsx2Q61412 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.42□□□□□ -0.42
Vsx2Q61412 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.42□□□□□ -0.42
Vsx2Q61412 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vsx2Q61412 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.41□□□□□ -0.42
Vsx2Q61412 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Gm12957-201ENSMUST00000117835 377 ntBASIC12.41□□□□□ -0.42
Vsx2Q61412 Gm11978-201ENSMUST00000122315 466 ntBASIC12.41□□□□□ -0.42
Vsx2Q61412 Gm2231-201ENSMUST00000125661 612 ntBASIC12.41□□□□□ -0.42
Vsx2Q61412 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Snora78-201ENSMUST00000158630 128 ntBASIC12.41□□□□□ -0.42
Vsx2Q61412 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.41□□□□□ -0.42
Vsx2Q61412 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vsx2Q61412 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Vsx2Q61412 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.4□□□□□ -0.42
Vsx2Q61412 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vsx2Q61412 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vsx2Q61412 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms