Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ripk1Q60855 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.02□□□□□ -0.49
Ripk1Q60855 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ripk1Q60855 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ripk1Q60855 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ripk1Q60855 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ripk1Q60855 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.02□□□□□ -0.49
Ripk1Q60855 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.02□□□□□ -0.49
Ripk1Q60855 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ripk1Q60855 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ripk1Q60855 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.02□□□□□ -0.49
Ripk1Q60855 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ripk1Q60855 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.01□□□□□ -0.49
Ripk1Q60855 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Ripk1Q60855 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.01□□□□□ -0.49
Ripk1Q60855 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.01□□□□□ -0.49
Ripk1Q60855 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.01□□□□□ -0.49
Ripk1Q60855 Gm13813-201ENSMUST00000120998 787 ntBASIC12.01□□□□□ -0.49
Ripk1Q60855 Gm24644-201ENSMUST00000157114 139 ntBASIC12.01□□□□□ -0.49
Ripk1Q60855 Gm22331-201ENSMUST00000158066 136 ntBASIC12.01□□□□□ -0.49
Ripk1Q60855 Gm27847-201ENSMUST00000183711 107 ntBASIC12.01□□□□□ -0.49
Ripk1Q60855 Gm27375-201ENSMUST00000183799 107 ntBASIC12.01□□□□□ -0.49
Ripk1Q60855 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.01□□□□□ -0.49
Ripk1Q60855 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.01□□□□□ -0.49
Ripk1Q60855 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.01□□□□□ -0.49
Ripk1Q60855 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ripk1Q60855 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ripk1Q60855 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12□□□□□ -0.49
Ripk1Q60855 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Ripk1Q60855 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12□□□□□ -0.49
Ripk1Q60855 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12□□□□□ -0.49
Ripk1Q60855 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Gm27331-201ENSMUST00000183705 60 ntBASIC12□□□□□ -0.49
Ripk1Q60855 Cdk7-205ENSMUST00000225990 1159 ntBASIC12□□□□□ -0.49
Ripk1Q60855 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ripk1Q60855 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Gm15163-201ENSMUST00000120749 1302 ntBASIC12□□□□□ -0.49
Ripk1Q60855 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12□□□□□ -0.49
Ripk1Q60855 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ripk1Q60855 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12□□□□□ -0.49
Ripk1Q60855 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ripk1Q60855 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ripk1Q60855 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ripk1Q60855 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ripk1Q60855 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ripk1Q60855 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.99□□□□□ -0.49
Ripk1Q60855 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.99□□□□□ -0.49
Ripk1Q60855 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ripk1Q60855 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms