Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.97□□□□□ -0.33
Spire1Q52KF3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Spire1Q52KF3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Gm8913-201ENSMUST00000209491 641 ntBASIC12.97□□□□□ -0.33
Spire1Q52KF3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.97□□□□□ -0.33
Spire1Q52KF3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Spire1Q52KF3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.96□□□□□ -0.33
Spire1Q52KF3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.96□□□□□ -0.33
Spire1Q52KF3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Gm11597-201ENSMUST00000121423 964 ntBASIC12.96□□□□□ -0.33
Spire1Q52KF3 Gm12566-201ENSMUST00000121479 359 ntBASIC12.96□□□□□ -0.33
Spire1Q52KF3 B9d1os-201ENSMUST00000137010 674 ntBASIC12.96□□□□□ -0.33
Spire1Q52KF3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Mir6979-201ENSMUST00000183927 56 ntBASIC12.96□□□□□ -0.33
Spire1Q52KF3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.96□□□□□ -0.33
Spire1Q52KF3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Gm37986-201ENSMUST00000193285 383 ntBASIC12.96□□□□□ -0.33
Spire1Q52KF3 Gm45433-201ENSMUST00000209386 247 ntBASIC12.96□□□□□ -0.33
Spire1Q52KF3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Spire1Q52KF3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Spire1Q52KF3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Spire1Q52KF3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Spire1Q52KF3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Spire1Q52KF3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Spire1Q52KF3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Spire1Q52KF3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spire1Q52KF3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Spire1Q52KF3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Spire1Q52KF3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Spire1Q52KF3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Spire1Q52KF3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spire1Q52KF3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spire1Q52KF3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spire1Q52KF3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spire1Q52KF3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spire1Q52KF3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spire1Q52KF3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Spire1Q52KF3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Spire1Q52KF3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms