Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.81□□□□□ -0.36
Usp30Q3UN04 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.81□□□□□ -0.36
Usp30Q3UN04 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.81□□□□□ -0.36
Usp30Q3UN04 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.81□□□□□ -0.36
Usp30Q3UN04 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Rubie-203ENSMUST00000227803 2430 ntBASIC12.81□□□□□ -0.36
Usp30Q3UN04 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usp30Q3UN04 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Usp30Q3UN04 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Usp30Q3UN04 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.8□□□□□ -0.36
Usp30Q3UN04 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Gm18558-201ENSMUST00000186253 1214 ntBASIC12.8□□□□□ -0.36
Usp30Q3UN04 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Gm8712-201ENSMUST00000221090 701 ntBASIC12.8□□□□□ -0.36
Usp30Q3UN04 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Usp30Q3UN04 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Grk6-205ENSMUST00000224653 2976 ntBASIC12.79□□□□□ -0.36
Usp30Q3UN04 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp30Q3UN04 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.79□□□□□ -0.36
Usp30Q3UN04 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Mir7070-201ENSMUST00000183657 86 ntBASIC12.79□□□□□ -0.36
Usp30Q3UN04 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.79□□□□□ -0.36
Usp30Q3UN04 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp30Q3UN04 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms