Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Limch1Q3UH68 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.99□□□□□ -0.01
Limch1Q3UH68 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Limch1Q3UH68 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.98□□□□□ -0.01
Limch1Q3UH68 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.98□□□□□ -0.01
Limch1Q3UH68 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Gm13350-201ENSMUST00000120519 479 ntBASIC14.98□□□□□ -0.01
Limch1Q3UH68 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.98□□□□□ -0.01
Limch1Q3UH68 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Gm7584-201ENSMUST00000175829 940 ntBASIC14.98□□□□□ -0.01
Limch1Q3UH68 Gm27243-201ENSMUST00000183964 521 ntBASIC14.98□□□□□ -0.01
Limch1Q3UH68 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.98□□□□□ -0.01
Limch1Q3UH68 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.98□□□□□ -0.01
Limch1Q3UH68 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Limch1Q3UH68 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Limch1Q3UH68 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.97□□□□□ -0.01
Limch1Q3UH68 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.97□□□□□ -0.01
Limch1Q3UH68 Gm43133-201ENSMUST00000197472 463 ntBASIC14.97□□□□□ -0.01
Limch1Q3UH68 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.97□□□□□ -0.01
Limch1Q3UH68 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Gm7783-201ENSMUST00000204795 781 ntBASIC14.97□□□□□ -0.01
Limch1Q3UH68 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.97□□□□□ -0.01
Limch1Q3UH68 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Limch1Q3UH68 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Limch1Q3UH68 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Gm38241-201ENSMUST00000192641 898 ntBASIC14.96□□□□□ -0.01
Limch1Q3UH68 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Limch1Q3UH68 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms