Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm15794-201ENSMUST00000120182 631 ntBASIC10.43□□□□□ -0.74
Trim63Q38HM4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Gm5479-201ENSMUST00000160578 435 ntBASIC10.43□□□□□ -0.74
Trim63Q38HM4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Mir7221-201ENSMUST00000184009 72 ntBASIC10.43□□□□□ -0.74
Trim63Q38HM4 Gm27390-201ENSMUST00000184516 176 ntBASIC10.43□□□□□ -0.74
Trim63Q38HM4 Gm27867-201ENSMUST00000184778 125 ntBASIC10.43□□□□□ -0.74
Trim63Q38HM4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trim63Q38HM4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.42□□□□□ -0.74
Trim63Q38HM4 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.42□□□□□ -0.74
Trim63Q38HM4 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Mir6982-201ENSMUST00000184354 68 ntBASIC10.42□□□□□ -0.74
Trim63Q38HM4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.42□□□□□ -0.74
Trim63Q38HM4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.42□□□□□ -0.74
Trim63Q38HM4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.42□□□□□ -0.74
Trim63Q38HM4 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trim63Q38HM4 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.41□□□□□ -0.74
Trim63Q38HM4 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.41□□□□□ -0.74
Trim63Q38HM4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.41□□□□□ -0.74
Trim63Q38HM4 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim63Q38HM4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms