Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.91□□□□□ -0.34
Ebf1Q07802 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.91□□□□□ -0.34
Ebf1Q07802 Gm27341-201ENSMUST00000183570 106 ntBASIC12.91□□□□□ -0.34
Ebf1Q07802 Gm2260-201ENSMUST00000184965 657 ntBASIC12.91□□□□□ -0.34
Ebf1Q07802 Gm37986-201ENSMUST00000193285 383 ntBASIC12.91□□□□□ -0.34
Ebf1Q07802 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.91□□□□□ -0.34
Ebf1Q07802 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.91□□□□□ -0.34
Ebf1Q07802 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.91□□□□□ -0.34
Ebf1Q07802 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ebf1Q07802 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ebf1Q07802 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ebf1Q07802 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.9□□□□□ -0.34
Ebf1Q07802 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ebf1Q07802 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.9□□□□□ -0.34
Ebf1Q07802 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Gm11439-201ENSMUST00000118598 409 ntBASIC12.9□□□□□ -0.34
Ebf1Q07802 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Gm22902-201ENSMUST00000158488 302 ntBASIC12.9□□□□□ -0.34
Ebf1Q07802 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Gm19208-201ENSMUST00000213861 912 ntBASIC12.9□□□□□ -0.34
Ebf1Q07802 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.9□□□□□ -0.34
Ebf1Q07802 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf1Q07802 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Ebf1Q07802 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Ebf1Q07802 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Ebf1Q07802 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.89□□□□□ -0.35
Ebf1Q07802 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ebf1Q07802 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Ebf1Q07802 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.89□□□□□ -0.35
Ebf1Q07802 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ebf1Q07802 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Gm11930-201ENSMUST00000117788 190 ntBASIC12.89□□□□□ -0.35
Ebf1Q07802 Gm14130-201ENSMUST00000118417 987 ntBASIC12.89□□□□□ -0.35
Ebf1Q07802 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.89□□□□□ -0.35
Ebf1Q07802 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.89□□□□□ -0.35
Ebf1Q07802 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ebf1Q07802 Mir5120-201ENSMUST00000175020 78 ntBASIC12.89□□□□□ -0.35
Ebf1Q07802 Gm22121-201ENSMUST00000175148 54 ntBASIC12.89□□□□□ -0.35
Ebf1Q07802 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.89□□□□□ -0.35
Ebf1Q07802 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.89□□□□□ -0.35
Ebf1Q07802 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.89□□□□□ -0.35
Ebf1Q07802 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf1Q07802 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ebf1Q07802 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms