Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Thbs3Q05895 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.19□□□□□ -0.62
Thbs3Q05895 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Gm13492-201ENSMUST00000119772 665 ntBASIC11.19□□□□□ -0.62
Thbs3Q05895 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.19□□□□□ -0.62
Thbs3Q05895 Mir1982-201ENSMUST00000157368 74 ntBASIC11.19□□□□□ -0.62
Thbs3Q05895 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.19□□□□□ -0.62
Thbs3Q05895 Gm25927-201ENSMUST00000175058 117 ntBASIC11.19□□□□□ -0.62
Thbs3Q05895 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Thbs3Q05895 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.19□□□□□ -0.62
Thbs3Q05895 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.19□□□□□ -0.62
Thbs3Q05895 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Thbs3Q05895 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.19□□□□□ -0.62
Thbs3Q05895 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Thbs3Q05895 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thbs3Q05895 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Thbs3Q05895 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.18□□□□□ -0.62
Thbs3Q05895 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.18□□□□□ -0.62
Thbs3Q05895 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.18□□□□□ -0.62
Thbs3Q05895 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Thbs3Q05895 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.18□□□□□ -0.62
Thbs3Q05895 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.18□□□□□ -0.62
Thbs3Q05895 Gm16379-201ENSMUST00000161469 348 ntBASIC11.18□□□□□ -0.62
Thbs3Q05895 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.18□□□□□ -0.62
Thbs3Q05895 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Thbs3Q05895 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.18□□□□□ -0.62
Thbs3Q05895 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.18□□□□□ -0.62
Thbs3Q05895 Gm8762-201ENSMUST00000193486 339 ntBASIC11.18□□□□□ -0.62
Thbs3Q05895 Gm18584-201ENSMUST00000203098 964 ntBASIC11.18□□□□□ -0.62
Thbs3Q05895 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Thbs3Q05895 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.18□□□□□ -0.62
Thbs3Q05895 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Thbs3Q05895 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Thbs3Q05895 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.18□□□□□ -0.62
Thbs3Q05895 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Thbs3Q05895 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Thbs3Q05895 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Thbs3Q05895 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.17□□□□□ -0.62
Thbs3Q05895 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Thbs3Q05895 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Thbs3Q05895 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.17□□□□□ -0.62
Thbs3Q05895 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.17□□□□□ -0.62
Thbs3Q05895 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.17□□□□□ -0.62
Thbs3Q05895 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Thbs3Q05895 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Thbs3Q05895 Snora78-201ENSMUST00000158630 128 ntBASIC11.17□□□□□ -0.62
Thbs3Q05895 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Thbs3Q05895 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Thbs3Q05895 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms