Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Gm12363-201ENSMUST00000122250 668 ntBASIC12.93□□□□□ -0.34
Gabpb1Q00420 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Gm9630-201ENSMUST00000178304 885 ntBASIC12.93□□□□□ -0.34
Gabpb1Q00420 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Gm32025-201ENSMUST00000217960 307 ntBASIC12.93□□□□□ -0.34
Gabpb1Q00420 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.93□□□□□ -0.34
Gabpb1Q00420 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Gabpb1Q00420 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.92□□□□□ -0.34
Gabpb1Q00420 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Gm15703-201ENSMUST00000120250 880 ntBASIC12.92□□□□□ -0.34
Gabpb1Q00420 Gm16296-201ENSMUST00000159905 325 ntBASIC12.92□□□□□ -0.34
Gabpb1Q00420 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Gm7029-201ENSMUST00000173226 450 ntBASIC12.92□□□□□ -0.34
Gabpb1Q00420 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Gm18187-201ENSMUST00000196476 984 ntBASIC12.92□□□□□ -0.34
Gabpb1Q00420 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.92□□□□□ -0.34
Gabpb1Q00420 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gabpb1Q00420 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gabpb1Q00420 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gabpb1Q00420 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gabpb1Q00420 Gm24526-201ENSMUST00000082921 158 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms