Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC17.67■□□□□ 0.42
Xrn1P97789 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Xrn1P97789 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Gm17213-201ENSMUST00000165161 1360 ntBASIC17.66■□□□□ 0.42
Xrn1P97789 AC238940.1-201ENSMUST00000225106 1858 ntBASIC17.66■□□□□ 0.42
Xrn1P97789 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Xrn1P97789 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Gm18893-201ENSMUST00000198416 943 ntBASIC17.66■□□□□ 0.42
Xrn1P97789 Gm44882-201ENSMUST00000205702 802 ntBASIC17.66■□□□□ 0.42
Xrn1P97789 AC154176.1-201ENSMUST00000225897 220 ntBASIC17.66■□□□□ 0.42
Xrn1P97789 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Xrn1P97789 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC17.66■□□□□ 0.42
Xrn1P97789 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Xrn1P97789 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Xrn1P97789 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Xrn1P97789 Zkscan3-207ENSMUST00000223831 2101 ntBASIC17.65■□□□□ 0.42
Xrn1P97789 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Xrn1P97789 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrn1P97789 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrn1P97789 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrn1P97789 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Xrn1P97789 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrn1P97789 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrn1P97789 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrn1P97789 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrn1P97789 Gm15004-201ENSMUST00000119192 630 ntBASIC17.65■□□□□ 0.42
Xrn1P97789 Gm15207-201ENSMUST00000119259 442 ntBASIC17.65■□□□□ 0.42
Xrn1P97789 Gm1848-201ENSMUST00000120711 789 ntBASIC17.65■□□□□ 0.42
Xrn1P97789 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC17.65■□□□□ 0.42
Xrn1P97789 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC17.65■□□□□ 0.42
Xrn1P97789 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC17.65■□□□□ 0.42
Xrn1P97789 Gm19009-201ENSMUST00000223072 823 ntBASIC17.65■□□□□ 0.42
Xrn1P97789 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Xrn1P97789 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC17.65■□□□□ 0.42
Xrn1P97789 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.65■□□□□ 0.42
Xrn1P97789 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Xrn1P97789 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Xrn1P97789 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Gm4654-201ENSMUST00000183305 982 ntBASIC17.64■□□□□ 0.41
Xrn1P97789 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC17.64■□□□□ 0.41
Xrn1P97789 Gm45113-201ENSMUST00000207518 165 ntBASIC17.64■□□□□ 0.41
Xrn1P97789 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Xrn1P97789 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Xrn1P97789 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Xrn1P97789 Gm18198-201ENSMUST00000204986 1551 ntBASIC17.64■□□□□ 0.41
Xrn1P97789 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Xrn1P97789 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Xrn1P97789 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Xrn1P97789 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.64■□□□□ 0.41
Xrn1P97789 Gm14585-201ENSMUST00000120713 634 ntBASIC17.64■□□□□ 0.41
Xrn1P97789 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Xrn1P97789 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC17.64■□□□□ 0.41
Xrn1P97789 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Xrn1P97789 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Xrn1P97789 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Xrn1P97789 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Xrn1P97789 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Xrn1P97789 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Xrn1P97789 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Xrn1P97789 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Xrn1P97789 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Xrn1P97789 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Xrn1P97789 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Xrn1P97789 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Xrn1P97789 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Xrn1P97789 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Xrn1P97789 Gm12816-201ENSMUST00000118069 1212 ntBASIC17.63■□□□□ 0.41
Xrn1P97789 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC17.63■□□□□ 0.41
Xrn1P97789 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Xrn1P97789 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC17.63■□□□□ 0.41
Xrn1P97789 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms