Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm15515-201ENSMUST00000117827 822 ntBASIC15.9■□□□□ 0.14
Smarcc1P97496 Gm13045-201ENSMUST00000119019 712 ntBASIC15.9■□□□□ 0.14
Smarcc1P97496 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc1P97496 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc1P97496 Gm21027-201ENSMUST00000219300 1236 ntBASIC15.9■□□□□ 0.14
Smarcc1P97496 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc1P97496 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc1P97496 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc1P97496 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc1P97496 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.9■□□□□ 0.14
Smarcc1P97496 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc1P97496 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.9■□□□□ 0.14
Smarcc1P97496 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc1P97496 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Smarcc1P97496 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.9■□□□□ 0.14
Smarcc1P97496 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc1P97496 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc1P97496 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarcc1P97496 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Smarcc1P97496 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Smarcc1P97496 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.89■□□□□ 0.13
Smarcc1P97496 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.89■□□□□ 0.13
Smarcc1P97496 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Smarcc1P97496 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.89■□□□□ 0.13
Smarcc1P97496 Gm12314-201ENSMUST00000118104 538 ntBASIC15.89■□□□□ 0.13
Smarcc1P97496 Gm11667-201ENSMUST00000119828 486 ntBASIC15.89■□□□□ 0.13
Smarcc1P97496 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Smarcc1P97496 Gm5616-201ENSMUST00000165252 384 ntBASIC15.89■□□□□ 0.13
Smarcc1P97496 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.89■□□□□ 0.13
Smarcc1P97496 Gm8741-201ENSMUST00000174736 384 ntBASIC15.89■□□□□ 0.13
Smarcc1P97496 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Smarcc1P97496 Gm9230-201ENSMUST00000188228 532 ntBASIC15.89■□□□□ 0.13
Smarcc1P97496 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Gm44551-201ENSMUST00000208804 171 ntBASIC15.89■□□□□ 0.13
Smarcc1P97496 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.89■□□□□ 0.13
Smarcc1P97496 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Smarcc1P97496 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.89■□□□□ 0.13
Smarcc1P97496 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.89■□□□□ 0.13
Smarcc1P97496 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcc1P97496 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.88■□□□□ 0.13
Smarcc1P97496 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.88■□□□□ 0.13
Smarcc1P97496 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.88■□□□□ 0.13
Smarcc1P97496 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Smarcc1P97496 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Smarcc1P97496 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Smarcc1P97496 Gm12165-201ENSMUST00000117047 342 ntBASIC15.88■□□□□ 0.13
Smarcc1P97496 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.88■□□□□ 0.13
Smarcc1P97496 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.88■□□□□ 0.13
Smarcc1P97496 Gm10051-201ENSMUST00000145209 414 ntBASIC15.88■□□□□ 0.13
Smarcc1P97496 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC15.88■□□□□ 0.13
Smarcc1P97496 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.88■□□□□ 0.13
Smarcc1P97496 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.88■□□□□ 0.13
Smarcc1P97496 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.88■□□□□ 0.13
Smarcc1P97496 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Smarcc1P97496 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC15.88■□□□□ 0.13
Smarcc1P97496 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.88■□□□□ 0.13
Smarcc1P97496 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.88■□□□□ 0.13
Smarcc1P97496 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Smarcc1P97496 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcc1P97496 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Smarcc1P97496 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcc1P97496 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcc1P97496 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcc1P97496 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcc1P97496 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.87■□□□□ 0.13
Smarcc1P97496 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcc1P97496 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.87■□□□□ 0.13
Smarcc1P97496 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms