Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Cacna1aP97445 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.76□□□□□ -0.53
Cacna1aP97445 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cacna1aP97445 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.76□□□□□ -0.53
Cacna1aP97445 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.76□□□□□ -0.53
Cacna1aP97445 Gm43610-201ENSMUST00000199117 365 ntBASIC11.76□□□□□ -0.53
Cacna1aP97445 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cacna1aP97445 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cacna1aP97445 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cacna1aP97445 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cacna1aP97445 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cacna1aP97445 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cacna1aP97445 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cacna1aP97445 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cacna1aP97445 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cacna1aP97445 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.75□□□□□ -0.53
Cacna1aP97445 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.75□□□□□ -0.53
Cacna1aP97445 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.75□□□□□ -0.53
Cacna1aP97445 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.75□□□□□ -0.53
Cacna1aP97445 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.75□□□□□ -0.53
Cacna1aP97445 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Gm13600-201ENSMUST00000117949 744 ntBASIC11.75□□□□□ -0.53
Cacna1aP97445 Gm7541-201ENSMUST00000118361 535 ntBASIC11.75□□□□□ -0.53
Cacna1aP97445 Gm12058-201ENSMUST00000118614 437 ntBASIC11.75□□□□□ -0.53
Cacna1aP97445 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.75□□□□□ -0.53
Cacna1aP97445 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.75□□□□□ -0.53
Cacna1aP97445 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.75□□□□□ -0.53
Cacna1aP97445 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.75□□□□□ -0.53
Cacna1aP97445 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.75□□□□□ -0.53
Cacna1aP97445 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.75□□□□□ -0.53
Cacna1aP97445 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cacna1aP97445 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cacna1aP97445 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.74□□□□□ -0.53
Cacna1aP97445 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Cacna1aP97445 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cacna1aP97445 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Cacna1aP97445 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.74□□□□□ -0.53
Cacna1aP97445 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Gm11801-201ENSMUST00000117807 746 ntBASIC11.74□□□□□ -0.53
Cacna1aP97445 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cacna1aP97445 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.74□□□□□ -0.53
Cacna1aP97445 Gm5616-201ENSMUST00000165252 384 ntBASIC11.74□□□□□ -0.53
Cacna1aP97445 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cacna1aP97445 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC11.74□□□□□ -0.53
Cacna1aP97445 Gm8741-201ENSMUST00000174736 384 ntBASIC11.74□□□□□ -0.53
Cacna1aP97445 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cacna1aP97445 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.74□□□□□ -0.53
Cacna1aP97445 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.74□□□□□ -0.53
Cacna1aP97445 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms