Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.55□□□□□ -0.4
Shox2P70390 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.55□□□□□ -0.4
Shox2P70390 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm25349-201ENSMUST00000177728 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm23616-201ENSMUST00000177797 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm25871-201ENSMUST00000177816 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm24752-201ENSMUST00000178240 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm24496-201ENSMUST00000178287 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm25649-201ENSMUST00000178476 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm25548-201ENSMUST00000178681 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm23147-201ENSMUST00000178841 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm26095-201ENSMUST00000179270 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm22171-201ENSMUST00000179283 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm23936-201ENSMUST00000179354 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm22619-201ENSMUST00000179516 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm25255-201ENSMUST00000179579 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm24755-201ENSMUST00000179691 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm26506-201ENSMUST00000179692 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm25086-201ENSMUST00000179931 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm23243-201ENSMUST00000180047 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm24659-201ENSMUST00000180212 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm24169-201ENSMUST00000180244 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm23689-201ENSMUST00000180354 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm27359-201ENSMUST00000184153 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm27785-201ENSMUST00000184268 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm27466-201ENSMUST00000184396 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm27703-201ENSMUST00000184836 110 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.55□□□□□ -0.4
Shox2P70390 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.55□□□□□ -0.4
Shox2P70390 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.55□□□□□ -0.4
Shox2P70390 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.55□□□□□ -0.4
Shox2P70390 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.55□□□□□ -0.4
Shox2P70390 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.55□□□□□ -0.4
Shox2P70390 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Shox2P70390 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Shox2P70390 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Shox2P70390 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.55□□□□□ -0.4
Shox2P70390 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Shox2P70390 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Shox2P70390 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Shox2P70390 Gm13365-201ENSMUST00000121188 973 ntBASIC12.54□□□□□ -0.4
Shox2P70390 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.54□□□□□ -0.4
Shox2P70390 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Gm3436-201ENSMUST00000179930 840 ntBASIC12.54□□□□□ -0.4
Shox2P70390 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Gm43703-201ENSMUST00000200523 763 ntBASIC12.54□□□□□ -0.4
Shox2P70390 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.54□□□□□ -0.4
Shox2P70390 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.54□□□□□ -0.4
Shox2P70390 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.54□□□□□ -0.4
Shox2P70390 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Shox2P70390 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Shox2P70390 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.53□□□□□ -0.4
Shox2P70390 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Shox2P70390 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms