Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.56□□□□□ -0.4
Traf6P70196 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.56□□□□□ -0.4
Traf6P70196 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.56□□□□□ -0.4
Traf6P70196 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Traf6P70196 Gm11918-201ENSMUST00000121660 179 ntBASIC12.56□□□□□ -0.4
Traf6P70196 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.56□□□□□ -0.4
Traf6P70196 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.56□□□□□ -0.4
Traf6P70196 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.56□□□□□ -0.4
Traf6P70196 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.56□□□□□ -0.4
Traf6P70196 Gm45384-201ENSMUST00000210451 277 ntBASIC12.56□□□□□ -0.4
Traf6P70196 Gm9908-201ENSMUST00000211534 448 ntBASIC12.56□□□□□ -0.4
Traf6P70196 Gm6458-201ENSMUST00000211573 635 ntBASIC12.56□□□□□ -0.4
Traf6P70196 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.56□□□□□ -0.4
Traf6P70196 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Traf6P70196 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Traf6P70196 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.56□□□□□ -0.4
Traf6P70196 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Traf6P70196 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.56□□□□□ -0.4
Traf6P70196 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Traf6P70196 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Traf6P70196 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Traf6P70196 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.56□□□□□ -0.4
Traf6P70196 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Traf6P70196 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.55□□□□□ -0.4
Traf6P70196 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.55□□□□□ -0.4
Traf6P70196 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.55□□□□□ -0.4
Traf6P70196 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.55□□□□□ -0.4
Traf6P70196 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.55□□□□□ -0.4
Traf6P70196 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.55□□□□□ -0.4
Traf6P70196 Gm28693-202ENSMUST00000190758 331 ntBASIC12.55□□□□□ -0.4
Traf6P70196 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.55□□□□□ -0.4
Traf6P70196 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.55□□□□□ -0.4
Traf6P70196 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Traf6P70196 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.55□□□□□ -0.4
Traf6P70196 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.55□□□□□ -0.4
Traf6P70196 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Traf6P70196 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Traf6P70196 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Traf6P70196 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf6P70196 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf6P70196 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf6P70196 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf6P70196 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Traf6P70196 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf6P70196 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf6P70196 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf6P70196 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf6P70196 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf6P70196 Gm23958-201ENSMUST00000157207 105 ntBASIC12.54□□□□□ -0.4
Traf6P70196 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Traf6P70196 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC12.54□□□□□ -0.4
Traf6P70196 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.54□□□□□ -0.4
Traf6P70196 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.54□□□□□ -0.4
Traf6P70196 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms