Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Lsm3P62311 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.57□□□□□ -0.56
Lsm3P62311 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lsm3P62311 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.57□□□□□ -0.56
Lsm3P62311 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.57□□□□□ -0.56
Lsm3P62311 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.57□□□□□ -0.56
Lsm3P62311 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.57□□□□□ -0.56
Lsm3P62311 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Lsm3P62311 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lsm3P62311 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.57□□□□□ -0.56
Lsm3P62311 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lsm3P62311 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Lsm3P62311 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.56□□□□□ -0.56
Lsm3P62311 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Lsm3P62311 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.56□□□□□ -0.56
Lsm3P62311 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.56□□□□□ -0.56
Lsm3P62311 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.56□□□□□ -0.56
Lsm3P62311 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.56□□□□□ -0.56
Lsm3P62311 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.56□□□□□ -0.56
Lsm3P62311 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Gm17330-201ENSMUST00000221047 165 ntBASIC11.56□□□□□ -0.56
Lsm3P62311 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.56□□□□□ -0.56
Lsm3P62311 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.56□□□□□ -0.56
Lsm3P62311 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.56□□□□□ -0.56
Lsm3P62311 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm3P62311 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Lsm3P62311 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Lsm3P62311 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Lsm3P62311 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Lsm3P62311 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Lsm3P62311 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.55□□□□□ -0.56
Lsm3P62311 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.55□□□□□ -0.56
Lsm3P62311 Gm17271-201ENSMUST00000165535 355 ntBASIC11.55□□□□□ -0.56
Lsm3P62311 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Lsm3P62311 Gm4804-201ENSMUST00000182234 999 ntBASIC11.55□□□□□ -0.56
Lsm3P62311 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Lsm3P62311 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.55□□□□□ -0.56
Lsm3P62311 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.55□□□□□ -0.56
Lsm3P62311 Gm18206-201ENSMUST00000207027 926 ntBASIC11.55□□□□□ -0.56
Lsm3P62311 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.55□□□□□ -0.56
Lsm3P62311 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm3P62311 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Lsm3P62311 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms