Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sf3b6P59708 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Sf3b6P59708 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.3□□□□□ -0.6
Sf3b6P59708 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sf3b6P59708 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sf3b6P59708 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.3□□□□□ -0.6
Sf3b6P59708 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Sf3b6P59708 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.3□□□□□ -0.6
Sf3b6P59708 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.3□□□□□ -0.6
Sf3b6P59708 Gm25116-201ENSMUST00000157191 122 ntBASIC11.3□□□□□ -0.6
Sf3b6P59708 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Gm21854-201ENSMUST00000179901 471 ntBASIC11.3□□□□□ -0.6
Sf3b6P59708 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Gm28760-201ENSMUST00000185995 736 ntBASIC11.3□□□□□ -0.6
Sf3b6P59708 Gm42550-201ENSMUST00000201553 960 ntBASIC11.3□□□□□ -0.6
Sf3b6P59708 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sf3b6P59708 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.3□□□□□ -0.6
Sf3b6P59708 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.3□□□□□ -0.6
Sf3b6P59708 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.3□□□□□ -0.6
Sf3b6P59708 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sf3b6P59708 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.3□□□□□ -0.6
Sf3b6P59708 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.29□□□□□ -0.6
Sf3b6P59708 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.29□□□□□ -0.6
Sf3b6P59708 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Gm12291-201ENSMUST00000121627 311 ntBASIC11.29□□□□□ -0.6
Sf3b6P59708 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Sf3b6P59708 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Gm6218-201ENSMUST00000219812 628 ntBASIC11.29□□□□□ -0.6
Sf3b6P59708 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.29□□□□□ -0.6
Sf3b6P59708 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Gm2423-201ENSMUST00000074863 733 ntBASIC11.29□□□□□ -0.6
Sf3b6P59708 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms