Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sssca1P56873 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Sssca1P56873 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.28□□□□□ -0.76
Sssca1P56873 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.28□□□□□ -0.76
Sssca1P56873 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.28□□□□□ -0.76
Sssca1P56873 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
Sssca1P56873 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sssca1P56873 Gm16202-201ENSMUST00000117532 544 ntBASIC10.28□□□□□ -0.76
Sssca1P56873 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.28□□□□□ -0.76
Sssca1P56873 Gm24694-201ENSMUST00000180054 110 ntBASIC10.28□□□□□ -0.76
Sssca1P56873 Gm27663-201ENSMUST00000184839 110 ntBASIC10.28□□□□□ -0.76
Sssca1P56873 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.28□□□□□ -0.76
Sssca1P56873 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.28□□□□□ -0.76
Sssca1P56873 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.28□□□□□ -0.76
Sssca1P56873 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sssca1P56873 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.28□□□□□ -0.76
Sssca1P56873 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Sssca1P56873 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Sssca1P56873 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sssca1P56873 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.27□□□□□ -0.76
Sssca1P56873 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sssca1P56873 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sssca1P56873 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sssca1P56873 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.27□□□□□ -0.76
Sssca1P56873 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sssca1P56873 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sssca1P56873 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Sssca1P56873 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Sssca1P56873 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Sssca1P56873 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Sssca1P56873 Gm13689-201ENSMUST00000119360 685 ntBASIC10.27□□□□□ -0.77
Sssca1P56873 Gm13813-201ENSMUST00000120998 787 ntBASIC10.27□□□□□ -0.77
Sssca1P56873 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.27□□□□□ -0.77
Sssca1P56873 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.27□□□□□ -0.77
Sssca1P56873 Gm44124-201ENSMUST00000204159 472 ntBASIC10.27□□□□□ -0.77
Sssca1P56873 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.27□□□□□ -0.77
Sssca1P56873 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.27□□□□□ -0.77
Sssca1P56873 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.27□□□□□ -0.77
Sssca1P56873 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Sssca1P56873 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.27□□□□□ -0.77
Sssca1P56873 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Sssca1P56873 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sssca1P56873 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Sssca1P56873 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Sssca1P56873 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sssca1P56873 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms