Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CckbrP56481 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CckbrP56481 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CckbrP56481 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CckbrP56481 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.81□□□□□ -0.52
CckbrP56481 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CckbrP56481 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.81□□□□□ -0.52
CckbrP56481 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.81□□□□□ -0.52
CckbrP56481 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.81□□□□□ -0.52
CckbrP56481 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.81□□□□□ -0.52
CckbrP56481 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.81□□□□□ -0.52
CckbrP56481 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.81□□□□□ -0.52
CckbrP56481 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
CckbrP56481 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Mir339-201ENSMUST00000083659 96 ntBASIC11.81□□□□□ -0.52
CckbrP56481 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.81□□□□□ -0.52
CckbrP56481 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
CckbrP56481 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CckbrP56481 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
CckbrP56481 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
CckbrP56481 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CckbrP56481 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CckbrP56481 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CckbrP56481 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CckbrP56481 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.8□□□□□ -0.52
CckbrP56481 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.8□□□□□ -0.52
CckbrP56481 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Gm25927-201ENSMUST00000175058 117 ntBASIC11.8□□□□□ -0.52
CckbrP56481 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.8□□□□□ -0.52
CckbrP56481 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CckbrP56481 Gm27514-201ENSMUST00000183692 110 ntBASIC11.8□□□□□ -0.52
CckbrP56481 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 AY702102-202ENSMUST00000194651 1173 ntBASIC11.8□□□□□ -0.52
CckbrP56481 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.8□□□□□ -0.52
CckbrP56481 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Gm32025-201ENSMUST00000217960 307 ntBASIC11.8□□□□□ -0.52
CckbrP56481 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.8□□□□□ -0.52
CckbrP56481 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CckbrP56481 Snora73a-201ENSMUST00000082453 205 ntBASIC11.8□□□□□ -0.52
CckbrP56481 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.8□□□□□ -0.52
CckbrP56481 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CckbrP56481 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.8□□□□□ -0.52
CckbrP56481 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
CckbrP56481 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.8□□□□□ -0.52
CckbrP56481 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CckbrP56481 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CckbrP56481 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CckbrP56481 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CckbrP56481 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CckbrP56481 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CckbrP56481 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.79□□□□□ -0.52
CckbrP56481 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CckbrP56481 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms