Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Ssr1-203ENSMUST00000225246 1825 ntBASIC16.04■□□□□ 0.16
Msh6P54276 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC16.04■□□□□ 0.16
Msh6P54276 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Msh6P54276 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Msh6P54276 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Gm43081-201ENSMUST00000199082 1380 ntBASIC16.04■□□□□ 0.16
Msh6P54276 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.04■□□□□ 0.16
Msh6P54276 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.04■□□□□ 0.16
Msh6P54276 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Msh6P54276 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Msh6P54276 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Msh6P54276 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Msh6P54276 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Gm13611-201ENSMUST00000118269 318 ntBASIC16.03■□□□□ 0.16
Msh6P54276 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC16.03■□□□□ 0.16
Msh6P54276 Gm8494-201ENSMUST00000178171 1233 ntBASIC16.03■□□□□ 0.16
Msh6P54276 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Msh6P54276 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC16.03■□□□□ 0.16
Msh6P54276 AC141438.2-201ENSMUST00000215068 271 ntBASIC16.03■□□□□ 0.16
Msh6P54276 AC135114.1-201ENSMUST00000228682 270 ntBASIC16.03■□□□□ 0.16
Msh6P54276 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.03■□□□□ 0.16
Msh6P54276 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC16.03■□□□□ 0.16
Msh6P54276 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Msh6P54276 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Msh6P54276 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Msh6P54276 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh6P54276 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh6P54276 Gm12380-201ENSMUST00000119012 544 ntBASIC16.02■□□□□ 0.16
Msh6P54276 Gm23119-201ENSMUST00000158610 140 ntBASIC16.02■□□□□ 0.16
Msh6P54276 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.02■□□□□ 0.16
Msh6P54276 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC16.02■□□□□ 0.16
Msh6P54276 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
Msh6P54276 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC16.02■□□□□ 0.16
Msh6P54276 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Msh6P54276 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC16.02■□□□□ 0.16
Msh6P54276 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh6P54276 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Msh6P54276 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh6P54276 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh6P54276 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh6P54276 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh6P54276 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh6P54276 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh6P54276 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh6P54276 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Msh6P54276 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Msh6P54276 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Msh6P54276 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC16.02■□□□□ 0.15
Msh6P54276 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Msh6P54276 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Msh6P54276 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Msh6P54276 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Msh6P54276 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Msh6P54276 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Msh6P54276 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Msh6P54276 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Msh6P54276 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Msh6P54276 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Msh6P54276 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Msh6P54276 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Msh6P54276 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Msh6P54276 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Msh6P54276 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Msh6P54276 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Msh6P54276 Gm9062-201ENSMUST00000117712 727 ntBASIC16.01■□□□□ 0.15
Msh6P54276 Gm13045-201ENSMUST00000119019 712 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms