Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.32□□□□□ -0.44
Lbx1P52955 Gm2875-201ENSMUST00000211333 360 ntBASIC12.32□□□□□ -0.44
Lbx1P52955 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.32□□□□□ -0.44
Lbx1P52955 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.32□□□□□ -0.44
Lbx1P52955 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.32□□□□□ -0.44
Lbx1P52955 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Lbx1P52955 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Lbx1P52955 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.32□□□□□ -0.44
Lbx1P52955 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.32□□□□□ -0.44
Lbx1P52955 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.32□□□□□ -0.44
Lbx1P52955 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lbx1P52955 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lbx1P52955 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.31□□□□□ -0.44
Lbx1P52955 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.31□□□□□ -0.44
Lbx1P52955 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Lbx1P52955 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.31□□□□□ -0.44
Lbx1P52955 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lbx1P52955 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.31□□□□□ -0.44
Lbx1P52955 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lbx1P52955 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Gm12337-201ENSMUST00000119634 400 ntBASIC12.31□□□□□ -0.44
Lbx1P52955 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.31□□□□□ -0.44
Lbx1P52955 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lbx1P52955 Gm8451-201ENSMUST00000170338 447 ntBASIC12.31□□□□□ -0.44
Lbx1P52955 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.31□□□□□ -0.44
Lbx1P52955 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lbx1P52955 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.31□□□□□ -0.44
Lbx1P52955 Gm5870-201ENSMUST00000196461 282 ntBASIC12.31□□□□□ -0.44
Lbx1P52955 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lbx1P52955 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.31□□□□□ -0.44
Lbx1P52955 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.31□□□□□ -0.44
Lbx1P52955 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.31□□□□□ -0.44
Lbx1P52955 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.31□□□□□ -0.44
Lbx1P52955 Gm7536-201ENSMUST00000077389 444 ntBASIC12.31□□□□□ -0.44
Lbx1P52955 Gm5453-201ENSMUST00000080866 447 ntBASIC12.31□□□□□ -0.44
Lbx1P52955 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lbx1P52955 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lbx1P52955 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lbx1P52955 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lbx1P52955 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
Lbx1P52955 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.3□□□□□ -0.44
Lbx1P52955 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.3□□□□□ -0.44
Lbx1P52955 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Lbx1P52955 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Gm13736-201ENSMUST00000119272 253 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms