Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.59□□□□□ -0.39
Pdx1P52946 AY702102-202ENSMUST00000194651 1173 ntBASIC12.59□□□□□ -0.39
Pdx1P52946 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.59□□□□□ -0.39
Pdx1P52946 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pdx1P52946 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pdx1P52946 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pdx1P52946 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.59□□□□□ -0.39
Pdx1P52946 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdx1P52946 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Pdx1P52946 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.58□□□□□ -0.4
Pdx1P52946 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.58□□□□□ -0.4
Pdx1P52946 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Pdx1P52946 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Gm8738-201ENSMUST00000172606 329 ntBASIC12.58□□□□□ -0.4
Pdx1P52946 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pdx1P52946 Gm37008-201ENSMUST00000195712 319 ntBASIC12.58□□□□□ -0.4
Pdx1P52946 Gm18584-201ENSMUST00000203098 964 ntBASIC12.58□□□□□ -0.4
Pdx1P52946 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.58□□□□□ -0.4
Pdx1P52946 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.58□□□□□ -0.4
Pdx1P52946 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.58□□□□□ -0.4
Pdx1P52946 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.58□□□□□ -0.4
Pdx1P52946 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pdx1P52946 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pdx1P52946 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.58□□□□□ -0.4
Pdx1P52946 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.58□□□□□ -0.4
Pdx1P52946 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdx1P52946 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pdx1P52946 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.57□□□□□ -0.4
Pdx1P52946 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pdx1P52946 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.57□□□□□ -0.4
Pdx1P52946 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdx1P52946 Gm8062-201ENSMUST00000139696 444 ntBASIC12.57□□□□□ -0.4
Pdx1P52946 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.57□□□□□ -0.4
Pdx1P52946 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pdx1P52946 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pdx1P52946 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.57□□□□□ -0.4
Pdx1P52946 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.57□□□□□ -0.4
Pdx1P52946 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.57□□□□□ -0.4
Pdx1P52946 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.57□□□□□ -0.4
Pdx1P52946 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pdx1P52946 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.57□□□□□ -0.4
Pdx1P52946 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pdx1P52946 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.57□□□□□ -0.4
Pdx1P52946 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.57□□□□□ -0.4
Pdx1P52946 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms