Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Lhx3P50481 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Gm24231-201ENSMUST00000104315 133 ntBASIC12.88□□□□□ -0.35
Lhx3P50481 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.88□□□□□ -0.35
Lhx3P50481 Gm14760-201ENSMUST00000121831 999 ntBASIC12.88□□□□□ -0.35
Lhx3P50481 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.88□□□□□ -0.35
Lhx3P50481 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.88□□□□□ -0.35
Lhx3P50481 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.88□□□□□ -0.35
Lhx3P50481 Gm37201-201ENSMUST00000191845 523 ntBASIC12.88□□□□□ -0.35
Lhx3P50481 Gm43822-201ENSMUST00000200285 476 ntBASIC12.88□□□□□ -0.35
Lhx3P50481 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.88□□□□□ -0.35
Lhx3P50481 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Lhx3P50481 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lhx3P50481 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.87□□□□□ -0.35
Lhx3P50481 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lhx3P50481 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Gm12314-201ENSMUST00000118104 538 ntBASIC12.87□□□□□ -0.35
Lhx3P50481 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Gm25043-201ENSMUST00000158604 212 ntBASIC12.87□□□□□ -0.35
Lhx3P50481 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Lhx3P50481 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Lhx3P50481 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.87□□□□□ -0.35
Lhx3P50481 Gm38341-201ENSMUST00000195357 515 ntBASIC12.87□□□□□ -0.35
Lhx3P50481 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.87□□□□□ -0.35
Lhx3P50481 Gm3961-201ENSMUST00000204425 994 ntBASIC12.87□□□□□ -0.35
Lhx3P50481 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lhx3P50481 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx3P50481 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lhx3P50481 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.87□□□□□ -0.35
Lhx3P50481 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Lhx3P50481 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.86□□□□□ -0.35
Lhx3P50481 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.86□□□□□ -0.35
Lhx3P50481 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Mir6420-201ENSMUST00000185032 102 ntBASIC12.86□□□□□ -0.35
Lhx3P50481 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.86□□□□□ -0.35
Lhx3P50481 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Gm21769-201ENSMUST00000211922 111 ntBASIC12.86□□□□□ -0.35
Lhx3P50481 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Gm30285-201ENSMUST00000214614 422 ntBASIC12.86□□□□□ -0.35
Lhx3P50481 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.86□□□□□ -0.35
Lhx3P50481 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.86□□□□□ -0.35
Lhx3P50481 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.86□□□□□ -0.35
Lhx3P50481 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lhx3P50481 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.86□□□□□ -0.35
Lhx3P50481 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx3P50481 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms