Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.92□□□□□ -0.5
Sox2P48432 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.92□□□□□ -0.5
Sox2P48432 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.92□□□□□ -0.5
Sox2P48432 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sox2P48432 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sox2P48432 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sox2P48432 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.92□□□□□ -0.5
Sox2P48432 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox2P48432 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox2P48432 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.91□□□□□ -0.5
Sox2P48432 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox2P48432 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.91□□□□□ -0.5
Sox2P48432 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sox2P48432 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox2P48432 Gm14350-201ENSMUST00000116642 640 ntBASIC11.91□□□□□ -0.5
Sox2P48432 Gm13813-201ENSMUST00000120998 787 ntBASIC11.91□□□□□ -0.5
Sox2P48432 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox2P48432 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Sox2P48432 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sox2P48432 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sox2P48432 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sox2P48432 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sox2P48432 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.91□□□□□ -0.5
Sox2P48432 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sox2P48432 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.91□□□□□ -0.5
Sox2P48432 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sox2P48432 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Sox2P48432 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.9□□□□□ -0.5
Sox2P48432 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Sox2P48432 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.9□□□□□ -0.5
Sox2P48432 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.9□□□□□ -0.5
Sox2P48432 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.9□□□□□ -0.5
Sox2P48432 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Gm27838-201ENSMUST00000184829 128 ntBASIC11.9□□□□□ -0.5
Sox2P48432 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.9□□□□□ -0.5
Sox2P48432 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.9□□□□□ -0.5
Sox2P48432 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.9□□□□□ -0.5
Sox2P48432 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.9□□□□□ -0.5
Sox2P48432 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.9□□□□□ -0.5
Sox2P48432 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.9□□□□□ -0.5
Sox2P48432 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sox2P48432 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.9□□□□□ -0.5
Sox2P48432 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sox2P48432 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.9□□□□□ -0.5
Sox2P48432 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox2P48432 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox2P48432 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.51
Sox2P48432 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.89□□□□□ -0.51
Sox2P48432 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox2P48432 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms