Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm12091-201ENSMUST00000146791 830 ntBASIC11.52□□□□□ -0.57
Rfx3P48381 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.52□□□□□ -0.57
Rfx3P48381 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.52□□□□□ -0.57
Rfx3P48381 Gm27701-201ENSMUST00000184498 110 ntBASIC11.52□□□□□ -0.57
Rfx3P48381 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.52□□□□□ -0.57
Rfx3P48381 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.52□□□□□ -0.57
Rfx3P48381 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rfx3P48381 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rfx3P48381 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.52□□□□□ -0.57
Rfx3P48381 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rfx3P48381 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfx3P48381 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rfx3P48381 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rfx3P48381 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Rfx3P48381 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Gm14350-201ENSMUST00000116642 640 ntBASIC11.51□□□□□ -0.57
Rfx3P48381 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.51□□□□□ -0.57
Rfx3P48381 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.51□□□□□ -0.57
Rfx3P48381 Gm28911-201ENSMUST00000188837 117 ntBASIC11.51□□□□□ -0.57
Rfx3P48381 Gm8515-201ENSMUST00000194852 576 ntBASIC11.51□□□□□ -0.57
Rfx3P48381 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.51□□□□□ -0.57
Rfx3P48381 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.51□□□□□ -0.57
Rfx3P48381 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.51□□□□□ -0.57
Rfx3P48381 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rfx3P48381 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.51□□□□□ -0.57
Rfx3P48381 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Rfx3P48381 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Rfx3P48381 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rfx3P48381 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.51□□□□□ -0.57
Rfx3P48381 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.51□□□□□ -0.57
Rfx3P48381 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rfx3P48381 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rfx3P48381 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.5□□□□□ -0.57
Rfx3P48381 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.5□□□□□ -0.57
Rfx3P48381 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.5□□□□□ -0.57
Rfx3P48381 Gm2495-201ENSMUST00000191160 466 ntBASIC11.5□□□□□ -0.57
Rfx3P48381 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.5□□□□□ -0.57
Rfx3P48381 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.5□□□□□ -0.57
Rfx3P48381 Gm9794-201ENSMUST00000202370 423 ntBASIC11.5□□□□□ -0.57
Rfx3P48381 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.5□□□□□ -0.57
Rfx3P48381 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rfx3P48381 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.5□□□□□ -0.57
Rfx3P48381 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Rfx3P48381 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rfx3P48381 Daam2-202ENSMUST00000224595 1926 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms