Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.79□□□□□ -0.36
RxrbP28704 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RxrbP28704 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.79□□□□□ -0.36
RxrbP28704 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RxrbP28704 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
RxrbP28704 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.79□□□□□ -0.36
RxrbP28704 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.79□□□□□ -0.36
RxrbP28704 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RxrbP28704 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
RxrbP28704 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.78□□□□□ -0.36
RxrbP28704 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Gm15371-201ENSMUST00000117057 784 ntBASIC12.78□□□□□ -0.36
RxrbP28704 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.78□□□□□ -0.36
RxrbP28704 Gm12151-201ENSMUST00000121374 290 ntBASIC12.78□□□□□ -0.36
RxrbP28704 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.78□□□□□ -0.36
RxrbP28704 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.78□□□□□ -0.36
RxrbP28704 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.78□□□□□ -0.36
RxrbP28704 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.78□□□□□ -0.36
RxrbP28704 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.78□□□□□ -0.36
RxrbP28704 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.78□□□□□ -0.36
RxrbP28704 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RxrbP28704 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.78□□□□□ -0.36
RxrbP28704 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RxrbP28704 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RxrbP28704 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RxrbP28704 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RxrbP28704 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RxrbP28704 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
RxrbP28704 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.77□□□□□ -0.36
RxrbP28704 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RxrbP28704 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RxrbP28704 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RxrbP28704 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.77□□□□□ -0.37
RxrbP28704 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
RxrbP28704 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RxrbP28704 Gm15376-201ENSMUST00000122258 783 ntBASIC12.77□□□□□ -0.37
RxrbP28704 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.77□□□□□ -0.37
RxrbP28704 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RxrbP28704 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.77□□□□□ -0.37
RxrbP28704 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.77□□□□□ -0.37
RxrbP28704 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
RxrbP28704 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.77□□□□□ -0.37
RxrbP28704 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RxrbP28704 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RxrbP28704 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms