Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm43947-201ENSMUST00000203019 959 ntBASIC14.25□□□□□ -0.13
Col2a1P28481 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col2a1P28481 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.25□□□□□ -0.13
Col2a1P28481 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col2a1P28481 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Col2a1P28481 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col2a1P28481 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.25□□□□□ -0.13
Col2a1P28481 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col2a1P28481 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.25□□□□□ -0.13
Col2a1P28481 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Col2a1P28481 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.25□□□□□ -0.13
Col2a1P28481 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.25□□□□□ -0.13
Col2a1P28481 Gm12196-201ENSMUST00000120954 262 ntBASIC14.25□□□□□ -0.13
Col2a1P28481 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Rprl1-201ENSMUST00000158050 327 ntBASIC14.25□□□□□ -0.13
Col2a1P28481 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.25□□□□□ -0.13
Col2a1P28481 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.25□□□□□ -0.13
Col2a1P28481 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.25□□□□□ -0.13
Col2a1P28481 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.25□□□□□ -0.13
Col2a1P28481 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.25□□□□□ -0.13
Col2a1P28481 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col2a1P28481 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col2a1P28481 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 Grk6-205ENSMUST00000224653 2976 ntBASIC14.24□□□□□ -0.13
Col2a1P28481 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.24□□□□□ -0.13
Col2a1P28481 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.24□□□□□ -0.13
Col2a1P28481 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.24□□□□□ -0.13
Col2a1P28481 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.24□□□□□ -0.13
Col2a1P28481 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col2a1P28481 Gm11511-201ENSMUST00000118146 540 ntBASIC14.24□□□□□ -0.13
Col2a1P28481 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.24□□□□□ -0.13
Col2a1P28481 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.24□□□□□ -0.13
Col2a1P28481 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.24□□□□□ -0.13
Col2a1P28481 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.24□□□□□ -0.13
Col2a1P28481 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col2a1P28481 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.24□□□□□ -0.13
Col2a1P28481 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col2a1P28481 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Col2a1P28481 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col2a1P28481 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col2a1P28481 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col2a1P28481 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col2a1P28481 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col2a1P28481 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col2a1P28481 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col2a1P28481 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col2a1P28481 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.23□□□□□ -0.13
Col2a1P28481 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.23□□□□□ -0.13
Col2a1P28481 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.23□□□□□ -0.13
Col2a1P28481 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col2a1P28481 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.23□□□□□ -0.13
Col2a1P28481 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.23□□□□□ -0.13
Col2a1P28481 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col2a1P28481 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col2a1P28481 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col2a1P28481 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.23□□□□□ -0.13
Col2a1P28481 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col2a1P28481 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col2a1P28481 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col2a1P28481 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Col2a1P28481 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col2a1P28481 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col2a1P28481 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Col2a1P28481 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col2a1P28481 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.22□□□□□ -0.13
Col2a1P28481 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms