Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Rmrp-201ENSMUST00000157463 271 ntBASIC14.16□□□□□ -0.14
Gjb1P28230 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gjb1P28230 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.16□□□□□ -0.14
Gjb1P28230 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.16□□□□□ -0.14
Gjb1P28230 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.16□□□□□ -0.14
Gjb1P28230 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.16□□□□□ -0.14
Gjb1P28230 Gm21811-201ENSMUST00000096485 930 ntBASIC14.16□□□□□ -0.14
Gjb1P28230 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Gjb1P28230 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Gjb1P28230 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.16□□□□□ -0.14
Gjb1P28230 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gjb1P28230 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.15□□□□□ -0.14
Gjb1P28230 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Gjb1P28230 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.15□□□□□ -0.14
Gjb1P28230 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gjb1P28230 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Gjb1P28230 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Gjb1P28230 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gjb1P28230 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Gjb1P28230 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Gm14644-201ENSMUST00000116671 647 ntBASIC14.15□□□□□ -0.14
Gjb1P28230 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Gjb1P28230 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.15□□□□□ -0.14
Gjb1P28230 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.15□□□□□ -0.14
Gjb1P28230 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.15□□□□□ -0.14
Gjb1P28230 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.15□□□□□ -0.14
Gjb1P28230 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.15□□□□□ -0.14
Gjb1P28230 Gm34023-201ENSMUST00000195539 217 ntBASIC14.15□□□□□ -0.14
Gjb1P28230 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gjb1P28230 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.15□□□□□ -0.14
Gjb1P28230 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gjb1P28230 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.15□□□□□ -0.15
Gjb1P28230 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.14□□□□□ -0.15
Gjb1P28230 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gjb1P28230 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gjb1P28230 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gjb1P28230 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gjb1P28230 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gjb1P28230 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gjb1P28230 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gjb1P28230 Gm12501-201ENSMUST00000119163 529 ntBASIC14.14□□□□□ -0.15
Gjb1P28230 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gjb1P28230 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.14□□□□□ -0.15
Gjb1P28230 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gjb1P28230 Gm37246-201ENSMUST00000192665 835 ntBASIC14.14□□□□□ -0.15
Gjb1P28230 AC156501.1-201ENSMUST00000228219 270 ntBASIC14.14□□□□□ -0.15
Gjb1P28230 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gjb1P28230 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gjb1P28230 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gjb1P28230 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gjb1P28230 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gjb1P28230 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gjb1P28230 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gjb1P28230 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gjb1P28230 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gjb1P28230 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.14□□□□□ -0.15
Gjb1P28230 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gjb1P28230 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gjb1P28230 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gjb1P28230 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gjb1P28230 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gjb1P28230 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gjb1P28230 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms