Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Cxcl1P12850 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.53□□□□□ -0.72
Cxcl1P12850 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.53□□□□□ -0.72
Cxcl1P12850 Gm28693-202ENSMUST00000190758 331 ntBASIC10.53□□□□□ -0.72
Cxcl1P12850 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cxcl1P12850 Gm18307-201ENSMUST00000206864 949 ntBASIC10.53□□□□□ -0.72
Cxcl1P12850 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.53□□□□□ -0.72
Cxcl1P12850 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.53□□□□□ -0.72
Cxcl1P12850 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cxcl1P12850 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.53□□□□□ -0.72
Cxcl1P12850 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl1P12850 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.52□□□□□ -0.72
Cxcl1P12850 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cxcl1P12850 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cxcl1P12850 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.52□□□□□ -0.72
Cxcl1P12850 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Cxcl1P12850 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cxcl1P12850 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.52□□□□□ -0.73
Cxcl1P12850 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cxcl1P12850 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl1P12850 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.52□□□□□ -0.73
Cxcl1P12850 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Cxcl1P12850 Gm14921-201ENSMUST00000118643 908 ntBASIC10.52□□□□□ -0.73
Cxcl1P12850 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.52□□□□□ -0.73
Cxcl1P12850 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.52□□□□□ -0.73
Cxcl1P12850 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.52□□□□□ -0.73
Cxcl1P12850 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.52□□□□□ -0.73
Cxcl1P12850 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.52□□□□□ -0.73
Cxcl1P12850 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.52□□□□□ -0.73
Cxcl1P12850 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl1P12850 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.52□□□□□ -0.73
Cxcl1P12850 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl1P12850 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cxcl1P12850 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Cxcl1P12850 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl1P12850 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl1P12850 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cxcl1P12850 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.51□□□□□ -0.73
Cxcl1P12850 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.51□□□□□ -0.73
Cxcl1P12850 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.51□□□□□ -0.73
Cxcl1P12850 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.51□□□□□ -0.73
Cxcl1P12850 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cxcl1P12850 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cxcl1P12850 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.51□□□□□ -0.73
Cxcl1P12850 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.51□□□□□ -0.73
Cxcl1P12850 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Gm12341-201ENSMUST00000119724 503 ntBASIC10.51□□□□□ -0.73
Cxcl1P12850 Gm10576-201ENSMUST00000191927 825 ntBASIC10.51□□□□□ -0.73
Cxcl1P12850 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.51□□□□□ -0.73
Cxcl1P12850 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Cxcl1P12850 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.51□□□□□ -0.73
Cxcl1P12850 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.51□□□□□ -0.73
Cxcl1P12850 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.51□□□□□ -0.73
Cxcl1P12850 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl1P12850 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cxcl1P12850 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms