Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.09□□□□□ -0.63
PtcraP0C6B2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.09□□□□□ -0.63
PtcraP0C6B2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Snora78-201ENSMUST00000158630 128 ntBASIC11.09□□□□□ -0.63
PtcraP0C6B2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Gm28196-201ENSMUST00000187719 640 ntBASIC11.09□□□□□ -0.63
PtcraP0C6B2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Gm19087-201ENSMUST00000191430 946 ntBASIC11.09□□□□□ -0.63
PtcraP0C6B2 Gm18584-201ENSMUST00000203098 964 ntBASIC11.09□□□□□ -0.63
PtcraP0C6B2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Gm26035-201ENSMUST00000083065 308 ntBASIC11.09□□□□□ -0.63
PtcraP0C6B2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.09□□□□□ -0.63
PtcraP0C6B2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PtcraP0C6B2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
PtcraP0C6B2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.08□□□□□ -0.64
PtcraP0C6B2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.08□□□□□ -0.64
PtcraP0C6B2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Gm25927-201ENSMUST00000175058 117 ntBASIC11.08□□□□□ -0.64
PtcraP0C6B2 Gm44882-201ENSMUST00000205702 802 ntBASIC11.08□□□□□ -0.64
PtcraP0C6B2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.08□□□□□ -0.64
PtcraP0C6B2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.08□□□□□ -0.64
PtcraP0C6B2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.08□□□□□ -0.64
PtcraP0C6B2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.08□□□□□ -0.64
PtcraP0C6B2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PtcraP0C6B2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms