Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Gm44958-201ENSMUST00000203734 736 ntBASIC16.39■□□□□ 0.21
Hoxc9P09633 Gm18393-201ENSMUST00000208349 1131 ntBASIC16.39■□□□□ 0.21
Hoxc9P09633 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC16.39■□□□□ 0.21
Hoxc9P09633 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.39■□□□□ 0.21
Hoxc9P09633 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC16.39■□□□□ 0.21
Hoxc9P09633 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC16.39■□□□□ 0.21
Hoxc9P09633 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc9P09633 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hoxc9P09633 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.38■□□□□ 0.21
Hoxc9P09633 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Hoxc9P09633 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hoxc9P09633 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Gm43721-201ENSMUST00000199677 2313 ntBASIC16.38■□□□□ 0.21
Hoxc9P09633 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Hoxc9P09633 Gm13045-201ENSMUST00000119019 712 ntBASIC16.38■□□□□ 0.21
Hoxc9P09633 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC16.38■□□□□ 0.21
Hoxc9P09633 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC16.38■□□□□ 0.21
Hoxc9P09633 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC16.38■□□□□ 0.21
Hoxc9P09633 Gm43962-201ENSMUST00000203898 190 ntBASIC16.38■□□□□ 0.21
Hoxc9P09633 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC16.38■□□□□ 0.21
Hoxc9P09633 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Hoxc9P09633 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hoxc9P09633 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Hoxc9P09633 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Gm43081-201ENSMUST00000199082 1380 ntBASIC16.38■□□□□ 0.21
Hoxc9P09633 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc9P09633 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Hoxc9P09633 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Hoxc9P09633 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Acot6-202ENSMUST00000222921 3622 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Gm12616-201ENSMUST00000118594 382 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC16.37■□□□□ 0.21
Hoxc9P09633 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC16.37■□□□□ 0.21
Hoxc9P09633 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Gm12624-201ENSMUST00000177615 382 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 Gm12621-201ENSMUST00000177760 382 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 Gm12615-201ENSMUST00000177970 382 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 Gm12622-201ENSMUST00000177975 382 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 Gm12627-201ENSMUST00000178412 382 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 Gm12625-201ENSMUST00000179122 382 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 Gm12614-201ENSMUST00000179586 382 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 Gm12613-201ENSMUST00000180323 382 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 Gm45770-201ENSMUST00000212105 616 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 AC154276.3-201ENSMUST00000227643 998 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 AC159308.2-201ENSMUST00000213592 2325 ntBASIC16.37■□□□□ 0.21
Hoxc9P09633 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc9P09633 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms