Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Mir433-201ENSMUST00000093564 124 ntBASIC18.88■□□□□ 0.61
NclP09405 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Gm7993-201ENSMUST00000200970 1384 ntBASIC18.88■□□□□ 0.61
NclP09405 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
NclP09405 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC18.88■□□□□ 0.61
NclP09405 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NclP09405 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NclP09405 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NclP09405 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NclP09405 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NclP09405 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NclP09405 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NclP09405 Gm11930-201ENSMUST00000117788 190 ntBASIC18.87■□□□□ 0.61
NclP09405 Gm12715-201ENSMUST00000121430 1128 ntBASIC18.87■□□□□ 0.61
NclP09405 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC18.87■□□□□ 0.61
NclP09405 Gm16570-201ENSMUST00000161951 436 ntBASIC18.87■□□□□ 0.61
NclP09405 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NclP09405 Gm8018-201ENSMUST00000173536 789 ntBASIC18.87■□□□□ 0.61
NclP09405 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NclP09405 Gm13097-201ENSMUST00000210722 397 ntBASIC18.87■□□□□ 0.61
NclP09405 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NclP09405 Gm10782-202ENSMUST00000223775 1480 ntBASIC18.87■□□□□ 0.61
NclP09405 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NclP09405 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NclP09405 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NclP09405 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NclP09405 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NclP09405 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NclP09405 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC18.86■□□□□ 0.61
NclP09405 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NclP09405 AC238940.1-201ENSMUST00000225106 1858 ntBASIC18.86■□□□□ 0.61
NclP09405 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
NclP09405 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NclP09405 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC18.86■□□□□ 0.61
NclP09405 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NclP09405 Gm15547-201ENSMUST00000122152 333 ntBASIC18.86■□□□□ 0.61
NclP09405 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NclP09405 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NclP09405 AC165260.3-202ENSMUST00000224550 1031 ntBASIC18.86■□□□□ 0.61
NclP09405 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 Gm37644-201ENSMUST00000192190 2270 ntBASIC18.86■□□□□ 0.61
NclP09405 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NclP09405 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC18.85■□□□□ 0.61
NclP09405 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC18.85■□□□□ 0.61
NclP09405 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC18.85■□□□□ 0.61
NclP09405 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
NclP09405 Gm37201-201ENSMUST00000191845 523 ntBASIC18.85■□□□□ 0.61
NclP09405 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
NclP09405 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NclP09405 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NclP09405 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NclP09405 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NclP09405 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NclP09405 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NclP09405 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
NclP09405 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NclP09405 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NclP09405 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NclP09405 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NclP09405 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NclP09405 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms