Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxb3P09026 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Hoxb3P09026 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxb3P09026 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxb3P09026 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hoxb3P09026 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxb3P09026 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.77□□□□□ -0.37
Hoxb3P09026 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxb3P09026 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Hoxb3P09026 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.76□□□□□ -0.37
Hoxb3P09026 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.76□□□□□ -0.37
Hoxb3P09026 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.76□□□□□ -0.37
Hoxb3P09026 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Gm13316-201ENSMUST00000140537 691 ntBASIC12.76□□□□□ -0.37
Hoxb3P09026 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Gm22121-201ENSMUST00000175148 54 ntBASIC12.76□□□□□ -0.37
Hoxb3P09026 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Hoxb3P09026 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC12.76□□□□□ -0.37
Hoxb3P09026 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.76□□□□□ -0.37
Hoxb3P09026 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Gm18944-201ENSMUST00000207672 643 ntBASIC12.76□□□□□ -0.37
Hoxb3P09026 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.76□□□□□ -0.37
Hoxb3P09026 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.76□□□□□ -0.37
Hoxb3P09026 Gm5781-201ENSMUST00000219792 443 ntBASIC12.76□□□□□ -0.37
Hoxb3P09026 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.76□□□□□ -0.37
Hoxb3P09026 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.76□□□□□ -0.37
Hoxb3P09026 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Hoxb3P09026 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Hoxb3P09026 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Hoxb3P09026 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Hoxb3P09026 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.76□□□□□ -0.37
Hoxb3P09026 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Hoxb3P09026 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Hoxb3P09026 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Hoxb3P09026 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.76□□□□□ -0.37
Hoxb3P09026 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Hoxb3P09026 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.76□□□□□ -0.37
Hoxb3P09026 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxb3P09026 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.75□□□□□ -0.37
Hoxb3P09026 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Hoxb3P09026 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Hoxb3P09026 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.75□□□□□ -0.37
Hoxb3P09026 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.75□□□□□ -0.37
Hoxb3P09026 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 Gm12502-201ENSMUST00000120197 444 ntBASIC12.75□□□□□ -0.37
Hoxb3P09026 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.75□□□□□ -0.37
Hoxb3P09026 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 Rmrp-201ENSMUST00000157463 271 ntBASIC12.75□□□□□ -0.37
Hoxb3P09026 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.75□□□□□ -0.37
Hoxb3P09026 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.75□□□□□ -0.37
Hoxb3P09026 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.75□□□□□ -0.37
Hoxb3P09026 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxb3P09026 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.75□□□□□ -0.37
Hoxb3P09026 Gm9136-201ENSMUST00000193368 454 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms