Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Hoxc8P09025 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Hoxc8P09025 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Hoxc8P09025 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.46□□□□□ -0.25
Hoxc8P09025 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Hoxc8P09025 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.46□□□□□ -0.25
Hoxc8P09025 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.46□□□□□ -0.25
Hoxc8P09025 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Gm13408-201ENSMUST00000119822 798 ntBASIC13.46□□□□□ -0.25
Hoxc8P09025 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Gm13935-201ENSMUST00000121859 798 ntBASIC13.46□□□□□ -0.25
Hoxc8P09025 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.46□□□□□ -0.25
Hoxc8P09025 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Hoxc8P09025 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.46□□□□□ -0.25
Hoxc8P09025 Gm7467-201ENSMUST00000185173 652 ntBASIC13.46□□□□□ -0.25
Hoxc8P09025 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Hoxc8P09025 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Hoxc8P09025 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.46□□□□□ -0.25
Hoxc8P09025 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Hoxc8P09025 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxc8P09025 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.46□□□□□ -0.26
Hoxc8P09025 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Hoxc8P09025 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxc8P09025 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxc8P09025 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Hoxc8P09025 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
Hoxc8P09025 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Hoxc8P09025 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.45□□□□□ -0.26
Hoxc8P09025 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.45□□□□□ -0.26
Hoxc8P09025 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Hoxc8P09025 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.45□□□□□ -0.26
Hoxc8P09025 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.45□□□□□ -0.26
Hoxc8P09025 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.45□□□□□ -0.26
Hoxc8P09025 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Hoxc8P09025 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Hoxc8P09025 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Hoxc8P09025 Gm13611-201ENSMUST00000118269 318 ntBASIC13.45□□□□□ -0.26
Hoxc8P09025 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.45□□□□□ -0.26
Hoxc8P09025 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.45□□□□□ -0.26
Hoxc8P09025 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.45□□□□□ -0.26
Hoxc8P09025 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.45□□□□□ -0.26
Hoxc8P09025 Gm17827-201ENSMUST00000211825 742 ntBASIC13.45□□□□□ -0.26
Hoxc8P09025 Gm45770-201ENSMUST00000212105 616 ntBASIC13.45□□□□□ -0.26
Hoxc8P09025 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.45□□□□□ -0.26
Hoxc8P09025 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.45□□□□□ -0.26
Hoxc8P09025 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Gm26035-201ENSMUST00000083065 308 ntBASIC13.45□□□□□ -0.26
Hoxc8P09025 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Hoxc8P09025 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.45□□□□□ -0.26
Hoxc8P09025 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Hoxc8P09025 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Hoxc8P09025 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Hoxc8P09025 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Hoxc8P09025 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms