Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col5a1O88207 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col5a1O88207 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col5a1O88207 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col5a1O88207 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col5a1O88207 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.33□□□□□ -0.6
Col5a1O88207 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col5a1O88207 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col5a1O88207 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col5a1O88207 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.33□□□□□ -0.6
Col5a1O88207 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.33□□□□□ -0.6
Col5a1O88207 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col5a1O88207 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Col5a1O88207 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Gm15881-201ENSMUST00000148792 942 ntBASIC11.32□□□□□ -0.6
Col5a1O88207 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.32□□□□□ -0.6
Col5a1O88207 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Col5a1O88207 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.32□□□□□ -0.6
Col5a1O88207 Gm43610-201ENSMUST00000199117 365 ntBASIC11.32□□□□□ -0.6
Col5a1O88207 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.32□□□□□ -0.6
Col5a1O88207 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.32□□□□□ -0.6
Col5a1O88207 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.32□□□□□ -0.6
Col5a1O88207 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Col5a1O88207 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.32□□□□□ -0.6
Col5a1O88207 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Col5a1O88207 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.32□□□□□ -0.6
Col5a1O88207 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Col5a1O88207 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.32□□□□□ -0.6
Col5a1O88207 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.32□□□□□ -0.6
Col5a1O88207 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.32□□□□□ -0.6
Col5a1O88207 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Gm23153-201ENSMUST00000175323 313 ntBASIC11.32□□□□□ -0.6
Col5a1O88207 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.32□□□□□ -0.6
Col5a1O88207 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.32□□□□□ -0.6
Col5a1O88207 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.32□□□□□ -0.6
Col5a1O88207 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.32□□□□□ -0.6
Col5a1O88207 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.32□□□□□ -0.6
Col5a1O88207 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.32□□□□□ -0.6
Col5a1O88207 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col5a1O88207 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.32□□□□□ -0.6
Col5a1O88207 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Col5a1O88207 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Col5a1O88207 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Col5a1O88207 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Col5a1O88207 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.31□□□□□ -0.6
Col5a1O88207 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.31□□□□□ -0.6
Col5a1O88207 Gm11989-201ENSMUST00000117240 672 ntBASIC11.31□□□□□ -0.6
Col5a1O88207 Gm11362-201ENSMUST00000118838 850 ntBASIC11.31□□□□□ -0.6
Col5a1O88207 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.31□□□□□ -0.6
Col5a1O88207 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Col5a1O88207 Gm3793-201ENSMUST00000204973 672 ntBASIC11.31□□□□□ -0.6
Col5a1O88207 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.31□□□□□ -0.6
Col5a1O88207 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col5a1O88207 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms