Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NpcdF8VQB8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Gm13047-201ENSMUST00000117116 815 ntBASIC15.3■□□□□ 0.04
NpcdF8VQB8 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
NpcdF8VQB8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.3■□□□□ 0.04
NpcdF8VQB8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NpcdF8VQB8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.29■□□□□ 0.04
NpcdF8VQB8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.29■□□□□ 0.04
NpcdF8VQB8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.29■□□□□ 0.04
NpcdF8VQB8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Gm11941-201ENSMUST00000119904 610 ntBASIC15.29■□□□□ 0.04
NpcdF8VQB8 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.29■□□□□ 0.04
NpcdF8VQB8 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Gm27627-201ENSMUST00000183644 150 ntBASIC15.29■□□□□ 0.04
NpcdF8VQB8 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Gm5369-201ENSMUST00000217499 588 ntBASIC15.29■□□□□ 0.04
NpcdF8VQB8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NpcdF8VQB8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NpcdF8VQB8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.29■□□□□ 0.04
NpcdF8VQB8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NpcdF8VQB8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC15.28■□□□□ 0.04
NpcdF8VQB8 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.28■□□□□ 0.04
NpcdF8VQB8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NpcdF8VQB8 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC15.28■□□□□ 0.04
NpcdF8VQB8 Gm14832-201ENSMUST00000121289 322 ntBASIC15.28■□□□□ 0.04
NpcdF8VQB8 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms