Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.96□□□□□ -0.49
Colca2F8VPY8 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.96□□□□□ -0.49
Colca2F8VPY8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Colca2F8VPY8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Colca2F8VPY8 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.96□□□□□ -0.5
Colca2F8VPY8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Colca2F8VPY8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.95□□□□□ -0.5
Colca2F8VPY8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gm26286-201ENSMUST00000104166 134 ntBASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gm11509-201ENSMUST00000117358 325 ntBASIC11.95□□□□□ -0.5
Colca2F8VPY8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gm22144-201ENSMUST00000157402 102 ntBASIC11.95□□□□□ -0.5
Colca2F8VPY8 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gm25072-201ENSMUST00000175233 235 ntBASIC11.95□□□□□ -0.5
Colca2F8VPY8 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.95□□□□□ -0.5
Colca2F8VPY8 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.95□□□□□ -0.5
Colca2F8VPY8 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.95□□□□□ -0.5
Colca2F8VPY8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.95□□□□□ -0.5
Colca2F8VPY8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.95□□□□□ -0.5
Colca2F8VPY8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Gm11340-201ENSMUST00000119226 412 ntBASIC11.94□□□□□ -0.5
Colca2F8VPY8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Colca2F8VPY8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.94□□□□□ -0.5
Colca2F8VPY8 Gm4726-201ENSMUST00000135604 736 ntBASIC11.94□□□□□ -0.5
Colca2F8VPY8 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Gm6019-201ENSMUST00000148369 736 ntBASIC11.94□□□□□ -0.5
Colca2F8VPY8 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.94□□□□□ -0.5
Colca2F8VPY8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Colca2F8VPY8 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.94□□□□□ -0.5
Colca2F8VPY8 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms