Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Gm7730-201ENSMUST00000212486 454 ntBASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh1F7BJK1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Gm16202-201ENSMUST00000117532 544 ntBASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Itm2b-204ENSMUST00000228637 783 ntBASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Pcdh1F7BJK1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Pcdh1F7BJK1 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Gm44397-201ENSMUST00000195950 113 ntBASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Gm35960-201ENSMUST00000202712 767 ntBASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Gm19220-201ENSMUST00000222682 803 ntBASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdh1F7BJK1 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms