Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cpsf4lE9Q2N0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.77□□□□□ -0.68
Cpsf4lE9Q2N0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.68
Cpsf4lE9Q2N0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cpsf4lE9Q2N0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cpsf4lE9Q2N0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cpsf4lE9Q2N0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Cpsf4lE9Q2N0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cpsf4lE9Q2N0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Gm12957-201ENSMUST00000117835 377 ntBASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Gm13492-201ENSMUST00000119772 665 ntBASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cpsf4lE9Q2N0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Gm19184-201ENSMUST00000196798 928 ntBASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cpsf4lE9Q2N0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms