Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gm12961-201ENSMUST00000120507 1050 ntBASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gm12291-201ENSMUST00000121627 311 ntBASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gm15982-201ENSMUST00000121681 554 ntBASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Gm19228-201ENSMUST00000214030 717 ntBASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 AC129017.2-201ENSMUST00000226118 1284 ntBASIC12.35□□□□□ -0.43
Col6a3E9PWQ3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Gm14270-201ENSMUST00000118388 846 ntBASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Gm26174-201ENSMUST00000158415 219 ntBASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Mir1905-201ENSMUST00000122779 82 ntBASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Gm7082-201ENSMUST00000209880 969 ntBASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a3E9PWQ3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col6a3E9PWQ3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Gm23769-201ENSMUST00000104441 121 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Gm11663-201ENSMUST00000117888 290 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Gm15815-201ENSMUST00000120569 255 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Gm6606-201ENSMUST00000193613 947 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Gm38135-201ENSMUST00000195068 502 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 CT571271.1-201ENSMUST00000227071 670 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Gm26286-201ENSMUST00000104166 134 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a3E9PWQ3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms